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Intron Name: Anas_platyrhynchos_platyrhynchos_26_101691_106419_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

101691 - 106419

Intron Length:

4729

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGGCCG

5'SS Class:

strong_major

3'SS Sequence:

GTTGTGTTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATCTCAA

U12 Branch Point Sequence:

GTCCCCAGATCT

Flanking Amino Acid:

ESRTNADIIETLRKKGFNGC

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.3

0.76

0.9

63.1

Major BPS

76.9

0.67

0.8

77.7

26.1

Major PPT

80.6

0.69

0.9

76.9

42.1

Minor 5ss

25.6

-2.8

30.2

Minor BPS

45.3

-0.2

64.58

44.9

Associated Gene:

Gene:

MEF2D

Ensembl Gene ID:

ENSAPLG00000007271

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029901

87158 - 140670

53513

ENSAPLT00000027360

87158 - 123637

36480

ENSAPLT00000017385

87158 - 140670

53513