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Intron Name: Anas_platyrhynchos_platyrhynchos_26_1025268_1025606_F


Intron Information:

Intron Rank:
4

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
1025268 - 1025606

Intron Length:
339

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTAACGGGA

5'SS Class:
major

3'SS Sequence:
TTGTCCCGTGCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
GTGTCAC

U12 Branch Point Sequence:
TCGGTGTCACCT

Flanking Amino Acid:
NRQGDKQHAQVVLERQNGSW

Intron Amino Acid Position:
85

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
74.9
0.59
1.2
64
42.4

Major BPS
57.2
0.18
1.4
63.1
44.5

Major PPT
75.2
0.57
1
69.9
36.5

Minor 5ss
34.1
-1.8
3.6
47.1
48.3

Minor BPS
38.9
-0.7
2.3
54.52
47.6

Associated Gene:

Gene:
TUFT1

Ensembl Gene ID:

Chromosome:
26

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

1022419 - 1031941
9523