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Intron Name: Anas_platyrhynchos_platyrhynchos_26_1029478_1030008_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1029478 - 1030008

Intron Length:

531

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGAGGA

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTTTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAG

U12 Branch Point Sequence:

GCAACTGCAAAC

Flanking Amino Acid:

QRKVRQMIEQLQNSKTVIQA

Intron Amino Acid Position:

257

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.5

0.84

0.8

71.2

34.5

Major BPS

72.5

0.56

1.5

71.7

44.6

Major PPT

100

1.12

0.4

100

Minor 5ss

24.3

-3

3.1

29.7

43.1

Minor BPS

38.5

-0.8

42.21

Associated Gene:

Gene:

TUFT1

Ensembl Gene ID:

ENSAPLG00000009480

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018507

1022419 - 1031941

9523

ENSAPLT00000009888

1022419 - 1031941

9523