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Intron Name: Anas_platyrhynchos_platyrhynchos_26_1055578_1059011_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

1055578 - 1059011

Intron Length:

3434

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCCCTGGG

5'SS Class:

weak_major

3'SS Sequence:

TTTGGGACCTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTCAC

U12 Branch Point Sequence:

TCATGCTCACCC

Flanking Amino Acid:

LAPVLGAAGPGCEDRAVPAG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

55.1

0.12

1.5

49.1

47.6

Major BPS

69.8

0.49

1.1

71.3

36.7

Major PPT

67.5

0.39

Minor 5ss

-2.1

3.2

41.6

44.8

Minor BPS

46.1

-0.3

2.2

59.12

45.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000009473

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009858

1050632 - 1059084

8453