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Intron Name: Anas_platyrhynchos_platyrhynchos_26_1059796_1060089_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1059796 - 1060089

Intron Length:

294

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATTTGC

5'SS Class:

strong_major

3'SS Sequence:

TCATTCTTCTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CCCTCAT

U12 Branch Point Sequence:

TCTGCCCTCATT

Flanking Amino Acid:

TTTLCFPSATGSPTLWWAVA

Intron Amino Acid Position:

222

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.7

0.82

0.9

75.1

Major BPS

0.5

1.1

71.2

35.2

Major PPT

0.72

0.8

80.5

31.2

Minor 5ss

40.6

-1

2.8

53.5

43.5

Minor BPS

48.8

-0

2.2

71.93

45.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025785

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030212

1058247 - 1061400

3154

ENSAPLT00000026765

1057210 - 1061400

4191

ENSAPLT00000045379

1058247 - 1061592

3346