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Intron Name: Anas_platyrhynchos_platyrhynchos_26_1060670_1060810_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1060670 - 1060810

Intron Length:

141

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTT|GTGAGTGTT

5'SS Class:

major

3'SS Sequence:

CTTTCTCCTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTTAA

U12 Branch Point Sequence:

TGTTCTTTAACC

Flanking Amino Acid:

VGKVQAGQDLNRNREANVVG

Intron Amino Acid Position:

284

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.3

0.57

76.1

32.8

Major BPS

74.7

0.61

65.9

40.9

Major PPT

86.5

0.82

0.7

81.2

23.9

Minor 5ss

35.7

-1.6

3.5

43.6

Minor BPS

85.6

1.1

0.9

87.16

29.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025785

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030212

1058247 - 1061400

3154

ENSAPLT00000026765

1057210 - 1061400

4191

ENSAPLT00000045379

1058247 - 1061592

3346