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Intron Name: Anas_platyrhynchos_platyrhynchos_26_1061054_1061226_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1061054 - 1061226

Intron Length:

173

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGCTTT

5'SS Class:

strong_major

3'SS Sequence:

CTCTGCTCCGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTAAC

U12 Branch Point Sequence:

CTGCCCCTAACG

Flanking Amino Acid:

IYSTIQPTKKSPSIRRKKLD

Intron Amino Acid Position:

328

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.1

0.9

0.8

83.9

30.3

Major BPS

59.7

0.24

1.1

61.2

32.6

Major PPT

74.6

0.55

0.8

68.7

31.7

Minor 5ss

44.3

-0.6

3.1

64.1

47.4

Minor BPS

56.1

0.05

1.9

61.63

45.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025785

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030212

1058247 - 1061400

3154

ENSAPLT00000026765

1057210 - 1061400

4191

ENSAPLT00000045379

1058247 - 1061592

3346