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Intron Name: Anas_platyrhynchos_platyrhynchos_26_1087506_1089157_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1087506 - 1089157

Intron Length:

1652

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTGAGTGTC

5'SS Class:

strong_major

3'SS Sequence:

TCTCCCCTGGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTGTGAT

U12 Branch Point Sequence:

AATTCTGTGATT

Flanking Amino Acid:

LFGVFTALHVGRLRKHTPLP

Intron Amino Acid Position:

241

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.78

0.9

75.7

34.4

Major BPS

68.9

0.47

1.2

60.7

45.9

Major PPT

73.2

0.52

0.9

69.2

31.3

Minor 5ss

31.4

-2.1

3.2

35.2

41.4

Minor BPS

53.5

0.19

73.5

37.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000015339

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034876

1082814 - 1090116

7303

ENSAPLT00000015980

1082905 - 1090116

7212