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Intron Name: Anas_platyrhynchos_platyrhynchos_26_1089876_1089952_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1089876 - 1089952

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGGAA

5'SS Class:

strong_major

3'SS Sequence:

TCCTTGTGAGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACTCAC

U12 Branch Point Sequence:

CCTTACTCACCT

Flanking Amino Acid:

HPTGLLAPLTEPRRGAHDGL

Intron Amino Acid Position:

323

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.94

0.8

78.3

31.1

Major BPS

77.2

0.68

0.8

77.6

26.2

Major PPT

68.5

0.42

65.3

39.9

Minor 5ss

28.5

-2.5

3.5

37.1

47.5

Minor BPS

48.6

-0

68.84

47.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000015339

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034876

1082814 - 1090116

7303

ENSAPLT00000015980

1082905 - 1090116

7212