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Intron Name: Anas_platyrhynchos_platyrhynchos_26_1091716_1094656_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

1091716 - 1094656

Intron Length:

2941

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

AGG|GCTGGTTTC

5'SS Class:

major

3'SS Sequence:

AAGAACCCCAAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

AAATCAG

U12 Branch Point Sequence:

TGGACCCCAAAG

Flanking Amino Acid:

ADPRCPLLPQGLRSGGAPHV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

64.6

0.35

1.4

65.1

43.5

Major BPS

49.1

-0

1.5

57.8

Major PPT

-0.1

38.4

33.9

Minor 5ss

-2.4

36.2

Minor BPS

-0.6

47.91

44.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017802

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021298

1091673 - 1100396

8724