Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_26_1101026_1101157_F

Intron Information:

Intron Rank:

142163

Intron Class:

major

Intron Phase:

Intron Coordinates:

1101026 - 1101157

Intron Length:

132

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCC|GTGAGTGCC

5'SS Class:

major

3'SS Sequence:

TCTCTCCCCATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCCCAT

U12 Branch Point Sequence:

AAGCCCCCATCT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

64.7

0.35

1.3

60.6

38.8

Major BPS

48.9

-0

1.3

39.1

Major PPT

74.4

0.55

0.7

69.2

24.8

Minor 5ss

30.4

-2.2

3.1

40.5

38.7

Minor BPS

42.8

-0.4

58.74

43.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000026552

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038045

1100819 - 1102586

1768