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Intron Name: Anas_platyrhynchos_platyrhynchos_26_1110981_1111066_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1110981 - 1111066

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGAGGG

5'SS Class:

strong_major

3'SS Sequence:

TGCCCCTCTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CACCCAC

U12 Branch Point Sequence:

GCGCACCCACCC

Flanking Amino Acid:

SGHSRSSRKHRDRRDRHRSK

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.8

0.9

65.9

40.1

Major BPS

46.9

-0.1

1.1

53.7

32.6

Major PPT

0.56

0.8

65.5

36.1

Minor 5ss

24.4

-2.9

3.1

29.4

43.3

Minor BPS

35.4

-1.1

1.9

38.74

39.1

Associated Gene:

Gene:

VANGL2

Ensembl Gene ID:

ENSAPLG00000024887

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018258

1105948 - 1111137

5190