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Intron Name: Anas_platyrhynchos_platyrhynchos_26_1138826_1139011_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1138826 - 1139011

Intron Length:

186

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACTTAAC

5'SS Class:

major

3'SS Sequence:

TATTTCTGTCCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TAATTTTTATTT

Flanking Amino Acid:

DANETQVIKQCYQDHNVPRD

Intron Amino Acid Position:

207

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.4

0.65

74.4

35.9

Major BPS

96.5

1.15

0.6

34.2

Major PPT

80.9

0.7

0.9

73.6

41.5

Minor 5ss

-1.7

2.9

45.5

42.6

Minor BPS

59.6

0.38

1.5

73.17

38.2

Associated Gene:

Gene:

NCSTN

Ensembl Gene ID:

ENSAPLG00000014723

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015415

1129463 - 1143118

13656