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Intron Name: Anas_platyrhynchos_platyrhynchos_26_1140955_1142375_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1140955 - 1142375

Intron Length:

1421

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGT|GTGAGTACA

5'SS Class:

major

3'SS Sequence:

TCTCTTTCTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ACACCAA

U12 Branch Point Sequence:

GTCACAGTGAGA

Flanking Amino Acid:

LNATHQIGCQSSISGDTGVI

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.2

0.5

1.1

69.7

36.3

Major BPS

44.1

-0.3

1.2

46.8

35.8

Major PPT

88.6

0.87

0.6

84.3

23.6

Minor 5ss

32.6

-2

2.7

35.6

40.5

Minor BPS

38.6

-0.9

2.3

48.84

41.7

Associated Gene:

Gene:

NCSTN

Ensembl Gene ID:

ENSAPLG00000014723

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015415

1129463 - 1143118

13656