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Intron Name: Anas_platyrhynchos_platyrhynchos_26_1143344_1143626_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1143344 - 1143626

Intron Length:

283

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGGCGGCC

5'SS Class:

major

3'SS Sequence:

CGTGTCTTGGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCTTCAT

U12 Branch Point Sequence:

GGTCCCTTCATC

Flanking Amino Acid:

KFETKSARVKGLSFHPKRPW

Intron Amino Acid Position:

185

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.26

1.2

56.4

Major BPS

0.62

1.1

77.2

Major PPT

69.6

0.44

1.1

65.1

41.2

Minor 5ss

29.2

-2.4

3.7

41.3

45.5

Minor BPS

57.2

0.21

1.8

65.58

39.9

Associated Gene:

Gene:

COPA

Ensembl Gene ID:

ENSAPLG00000013799

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014509

1142791 - 1163663

20873