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Intron Name: Anas_platyrhynchos_platyrhynchos_26_1144584_1144865_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1144584 - 1144865

Intron Length:

282

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAC|GTAAGCTCC

5'SS Class:

major

3'SS Sequence:

TTTGTCTTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTAGAT

U12 Branch Point Sequence:

ATTATTTTAGAT

Flanking Amino Acid:

DYIRTTFFHHEYPWILSASD

Intron Amino Acid Position:

275

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.3

0.53

1.3

66.7

40.1

Major BPS

79.2

0.72

Major PPT

86.5

0.82

0.7

85.4

29.4

Minor 5ss

46.5

-0.4

2.7

59.7

38.3

Minor BPS

52.4

0.15

1.7

72.02

38.8

Associated Gene:

Gene:

COPA

Ensembl Gene ID:

ENSAPLG00000013799

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014509

1142791 - 1163663

20873