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Intron Name: Anas_platyrhynchos_platyrhynchos_26_1144943_1145506_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1144943 - 1145506

Intron Length:

564

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAAATCA

5'SS Class:

major

3'SS Sequence:

CTTTTTGTTGTAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTAAAT

U12 Branch Point Sequence:

TTATGTTTAAAT

Flanking Amino Acid:

VWNWQSRTCVCVLTGHNHYV

Intron Amino Acid Position:

300

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.1

0.57

66.4

33.2

Major BPS

82.3

0.8

0.9

87.6

25.7

Major PPT

84.3

0.77

0.8

80.6

31.4

Minor 5ss

37.7

-1.4

3.1

45.3

44.6

Minor BPS

63.7

0.51

1.8

81.97

39.4

Associated Gene:

Gene:

COPA

Ensembl Gene ID:

ENSAPLG00000013799

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014509

1142791 - 1163663

20873