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Intron Name: Anas_platyrhynchos_platyrhynchos_26_1151087_1151522_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1151087 - 1151522

Intron Length:

436

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTTAGTGCA

5'SS Class:

major

3'SS Sequence:

GTTGCATGTTTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTTAT

U12 Branch Point Sequence:

TTTTCTTTACAT

Flanking Amino Acid:

KSIRVWDMSKRTGVQTFRRD

Intron Amino Acid Position:

452

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.9

0.56

1.2

67.5

37.8

Major BPS

91.4

1.03

0.7

79.9

34.9

Major PPT

65.9

0.36

62.8

43.3

Minor 5ss

29.8

-2.3

2.9

35.4

40.6

Minor BPS

70.5

0.72

1.7

88.96

35.8

Associated Gene:

Gene:

COPA

Ensembl Gene ID:

ENSAPLG00000013799

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014509

1142791 - 1163663

20873