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Intron Name: Anas_platyrhynchos_platyrhynchos_26_1152283_1152388_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1152283 - 1152388

Intron Length:

106

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACA|GTAAGTCAA

5'SS Class:

major

3'SS Sequence:

CATCTTTGTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGAAAA

U12 Branch Point Sequence:

CTACCTTGAAAA

Flanking Amino Acid:

PAENAVLLCTRASNLENSTY

Intron Amino Acid Position:

553

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.6

0.6

68.2

38.6

Major BPS

0.2

1.2

65.3

38.6

Major PPT

77.2

0.61

0.9

72.5

37.3

Minor 5ss

35.7

-1.6

2.9

46.8

42.6

Minor BPS

50.5

0.01

1.6

60.08

39.3

Associated Gene:

Gene:

COPA

Ensembl Gene ID:

ENSAPLG00000013799

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014509

1142791 - 1163663

20873