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Intron Name: Anas_platyrhynchos_platyrhynchos_26_1154635_1155608_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

1154635 - 1155608

Intron Length:

974

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTAAGGGGA

5'SS Class:

major

3'SS Sequence:

CATCAAATGGCAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

ATCAAAT

U12 Branch Point Sequence:

GTCTCATCAAAT

Flanking Amino Acid:

RFAVLDRMHSILIKNLKNEI

Intron Amino Acid Position:

606

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.2

0.69

64.4

41.8

Major BPS

68.5

0.46

73.3

28.9

Major PPT

58.1

0.18

1.1

51.7

41.1

Minor 5ss

29.1

-2.4

3.5

38.1

46.8

Minor BPS

51.1

0.11

1.9

72.04

Associated Gene:

Gene:

COPA

Ensembl Gene ID:

ENSAPLG00000013799

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014509

1142791 - 1163663

20873