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Intron Name: Anas_platyrhynchos_platyrhynchos_26_1157314_1157633_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1157314 - 1157633

Intron Length:

320

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGTCTG

5'SS Class:

strong_major

3'SS Sequence:

TGTGTTGGCATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGAACAT

U12 Branch Point Sequence:

ATGGTGTGAACA

Flanking Amino Acid:

SNHIKYAVTTGDHGIIRTLD

Intron Amino Acid Position:

727

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.1

0.83

72.7

44.5

Major BPS

55.8

0.15

1.3

63.4

42.8

Major PPT

62.1

0.27

43.4

Minor 5ss

37.4

-1.4

42.1

44.4

Minor BPS

45.3

-0.3

2.2

57.72

42.1

Associated Gene:

Gene:

COPA

Ensembl Gene ID:

ENSAPLG00000013799

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014509

1142791 - 1163663

20873