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Intron Name: Anas_platyrhynchos_platyrhynchos_26_1159191_1159423_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1159191 - 1159423

Intron Length:

233

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTTAGTGAC

5'SS Class:

major

3'SS Sequence:

CCTTTCTGCTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTTAT

U12 Branch Point Sequence:

TGGCCTTTAGCT

Flanking Amino Acid:

KETFDPEKETIPDIDPNAKL

Intron Amino Acid Position:

956

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.2

0.57

1.2

68.2

Major BPS

78.8

0.72

67.9

40.1

Major PPT

77.1

0.61

0.9

32.5

Minor 5ss

29.8

-2.3

37.3

40.2

Minor BPS

60.5

0.41

1.6

74.25

42.5

Associated Gene:

Gene:

COPA

Ensembl Gene ID:

ENSAPLG00000013799

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014509

1142791 - 1163663

20873