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Intron Name: Anas_platyrhynchos_platyrhynchos_26_1159931_1160014_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1159931 - 1160014

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGGGTAAA

5'SS Class:

strong_major

3'SS Sequence:

CCTCCTCGTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTAAC

U12 Branch Point Sequence:

GGAGCTCTAACT

Flanking Amino Acid:

GEDAELQLDEDGFVDAGEGF

Intron Amino Acid Position:

1027

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.7

0.79

0.9

79.3

31.1

Major BPS

72.3

0.55

73.3

28.9

Major PPT

73.9

0.54

0.9

68.4

31.8

Minor 5ss

28.2

-2.5

2.8

32.2

42.5

Minor BPS

50.9

0.11

1.8

67.23

43.1

Associated Gene:

Gene:

COPA

Ensembl Gene ID:

ENSAPLG00000013799

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014509

1142791 - 1163663

20873