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Intron Name: Anas_platyrhynchos_platyrhynchos_26_1160125_1160328_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1160125 - 1160328

Intron Length:

204

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGGGGC

5'SS Class:

strong_major

3'SS Sequence:

TGTCTTCCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CGCTAAT

U12 Branch Point Sequence:

TGCACGCTAATT

Flanking Amino Acid:

EEDLDLPPELDVPAGPAGGG

Intron Amino Acid Position:

1064

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.1

0.71

66.2

39.3

Major BPS

0.42

1.2

67.3

37.8

Major PPT

77.9

0.63

0.8

69.8

36.6

Minor 5ss

29.7

-2.3

3.5

37.8

42.4

Minor BPS

45.7

-0.2

2.3

66.06

44.6

Associated Gene:

Gene:

COPA

Ensembl Gene ID:

ENSAPLG00000013799

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014509

1142791 - 1163663

20873