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Intron Name: Anas_platyrhynchos_platyrhynchos_26_1160407_1160605_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1160407 - 1160605

Intron Length:

199

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACAGCA

5'SS Class:

major

3'SS Sequence:

TCCCATCTTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCCCAT

U12 Branch Point Sequence:

TTTTTCCCATCT

Flanking Amino Acid:

PPTKGTSPAQVWCNNSQLPV

Intron Amino Acid Position:

1090

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.64

1.1

68.7

36.4

Major BPS

72.3

0.55

1.2

80.7

33.2

Major PPT

74.6

0.55

0.8

31.1

Minor 5ss

36.3

-1.6

3.3

48.6

47.1

Minor BPS

50.7

0.1

2.1

80.75

40.9

Associated Gene:

Gene:

COPA

Ensembl Gene ID:

ENSAPLG00000013799

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014509

1142791 - 1163663

20873