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Intron Name: Anas_platyrhynchos_platyrhynchos_26_1160675_1160894_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1160675 - 1160894

Intron Length:

220

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGA|GTAAGTTAC

5'SS Class:

major

3'SS Sequence:

GTATTCTTTCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTTAC

U12 Branch Point Sequence:

TTTTACTCAGCA

Flanking Amino Acid:

LAGSFETAMRLLHDQVGVTN

Intron Amino Acid Position:

1113

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.7

0.63

72.1

34.3

Major BPS

74.2

0.6

39.4

Major PPT

82.1

0.72

0.9

73.5

41.6

Minor 5ss

41.8

-0.9

2.8

49.1

41.3

Minor BPS

0.25

77.21

39.3

Associated Gene:

Gene:

COPA

Ensembl Gene ID:

ENSAPLG00000013799

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014509

1142791 - 1163663

20873