Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_26_1172502_1172974_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1172502 - 1172974

Intron Length:

473

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCG|GTGAGTGCT

5'SS Class:

strong_major

3'SS Sequence:

GCTTTCCCTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTAAAAT

U12 Branch Point Sequence:

TTTTGTTTCCCT

Flanking Amino Acid:

IQKEFADAIANPHDPQTIDK

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.9

0.78

0.9

75.3

34.6

Major BPS

58.2

0.21

1.2

65.3

36.8

Major PPT

80.3

0.68

0.8

73.8

31.3

Minor 5ss

30.4

-2.2

3.2

42.4

44.3

Minor BPS

41.2

-0.5

3.7

78.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000026701

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034267

1171265 - 1173133

1869