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Intron Name: Anas_platyrhynchos_platyrhynchos_26_1179486_1179617_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1179486 - 1179617

Intron Length:

132

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTGAGGATC

5'SS Class:

strong_major

3'SS Sequence:

TGTCTCCTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCTGAT

U12 Branch Point Sequence:

CTTTGCTGATAC

Flanking Amino Acid:

IEQEFADVIVNPHDPNTIEK

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.1

0.71

0.9

74.7

35.1

Major BPS

76.2

0.65

1.1

65.3

43.7

Major PPT

83.4

0.75

0.8

77.3

31.4

Minor 5ss

31.5

-2.1

3.2

39.8

40.4

Minor BPS

45.2

-0.3

2.2

60.33

44.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000031086

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029823

1178178 - 1179755

1578