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PNB, Uconn

Construction by: Audrey Weber

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Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_26_11861_11969_F

Intron Information:

Intron Rank:
149103
Intron Class:
major
Intron Phase:
Intron Coordinates:
11861 - 11969
Intron Length:
109

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
CAG|GTAACGGCG
5'SS Class:
major
3'SS Sequence:
TCTCCCCTCCCAG|A
3'SS Class:
major_PPT
U2 Branch Point Sequence:
CTCTCAC
U12 Branch Point Sequence:
CCTCTCACATCT
Flanking Amino Acid:
Intron Amino Acid Position:

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
74.2
0.57
1.2
61.4
42.5
Major BPS
72.7
0.56
1
75
30.1
Major PPT
77.7
0.62
0.7
69.1
31.4
Minor 5ss
35.1
-1.7
3.5
47.6
48
Minor BPS
42
-0.5
2
57.99
44.8

Associated Gene:

Gene:
Ensembl Gene ID:
ENSAPLG00000030170
Chromosome:
26

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000032273
10534 - 12082
1549