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Intron Name: Anas_platyrhynchos_platyrhynchos_26_123638_140567_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

123638 - 140567

Intron Length:

16930

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTGAGTCAG

5'SS Class:

major

3'SS Sequence:

TTTCCTCTTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GCCTCAC

U12 Branch Point Sequence:

TCAGCCTCACGG

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.7

0.7

64.9

42.8

Major BPS

54.7

0.12

1.2

59.2

39.1

Major PPT

89.6

0.89

0.6

84.7

22.9

Minor 5ss

27.7

-2.6

2.7

23.9

36.9

Minor BPS

41.3

-0.8

2.1

43.76

47.7

Associated Gene:

Gene:

MEF2D

Ensembl Gene ID:

ENSAPLG00000007271

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029901

87158 - 140670

53513

ENSAPLT00000017385

87158 - 140670

53513