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Intron Name: Anas_platyrhynchos_platyrhynchos_26_1295323_1296094_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

5UTR

Intron Coordinates:

1295323 - 1296094

Intron Length:

772

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGGCGAA

5'SS Class:

major

3'SS Sequence:

GATAATGCATTAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TGATAAT

U12 Branch Point Sequence:

TTTTGTTTGATA

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.3

0.6

64.6

37.4

Major BPS

72.6

0.56

1.2

72.3

40.4

Major PPT

52.4

0.06

1.1

48.9

44.2

Minor 5ss

28.8

-2.4

3.5

36.6

47.9

Minor BPS

64.4

0.45

1.7

77.53

33.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020359

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040104

1294935 - 1297717

2783