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Intron Name: Anas_platyrhynchos_platyrhynchos_26_1295672_1296062_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

5UTR

Intron Coordinates:

1295672 - 1296062

Intron Length:

391

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGTGGATA

5'SS Class:

strong_major

3'SS Sequence:

GGGGCAGTTACAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

AAATAAT

U12 Branch Point Sequence:

ATTGCATTATCT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.3

0.71

0.9

76.5

33.8

Major BPS

71.2

0.53

70.3

31.9

Major PPT

56.6

0.15

1.1

46.1

45.1

Minor 5ss

36.5

-1.5

3.2

47.6

48.1

Minor BPS

57.3

0.31

79.65

42.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020359

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032211

1295530 - 1297749

2220