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Intron Name: Anas_platyrhynchos_platyrhynchos_26_1436684_1437887_F

Intron Information:

Intron Rank:

141486

Intron Class:

major

Intron Phase:

Intron Coordinates:

1436684 - 1437887

Intron Length:

1204

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGTGCA

5'SS Class:

strong_major

3'SS Sequence:

TGCTGTCTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CACTGAG

U12 Branch Point Sequence:

CTGAGCCTACCC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.7

0.89

0.9

76.8

31.8

Major BPS

48.9

-0

1.5

46.7

38.9

Major PPT

80.3

0.68

0.9

76.9

37.4

Minor 5ss

33.1

-1.9

3.1

38.4

40.8

Minor BPS

40.9

-0.7

2.2

51.22

45.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000026195

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020430

1436473 - 1439265

2793