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Intron Name: Anas_platyrhynchos_platyrhynchos_26_1523894_1526354_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

1523894 - 1526354

Intron Length:

2461

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

CTT|GCCAGCAGT

5'SS Class:

weak_major

3'SS Sequence:

ACCTGTGCTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AACAAAA

U12 Branch Point Sequence:

GGTGCCCAAACA

Flanking Amino Acid:

DPCQKPCCDPCCAQGLLSGP

Intron Amino Acid Position:

191

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

53.8

0.09

1.4

61.5

42.6

Major BPS

51.5

0.04

0.9

57.3

24.9

Major PPT

0.41

57.7

42.7

Minor 5ss

28.8

-2.4

3.9

46.5

42.9

Minor BPS

47.5

-0.1

2.1

61.69

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030030

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039088

1523119 - 1526548

3430