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Intron Name: Anas_platyrhynchos_platyrhynchos_26_15315_15415_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

15315 - 15415

Intron Length:

101

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTGCCTCC

5'SS Class:

weak_major

3'SS Sequence:

CCCCCCCCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CGCTCAC

U12 Branch Point Sequence:

GTGTCCCCACGT

Flanking Amino Acid:

DAFCFTSALQGEVYFIRGHL

Intron Amino Acid Position:

287

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

53.2

0.08

1.4

49.7

42.3

Major BPS

57.5

0.19

1.1

60.7

37.6

Major PPT

66.9

0.38

0.7

57.1

27.1

Minor 5ss

45.6

-0.5

2.9

60.7

43.9

Minor BPS

41.8

-0.5

2.3

61.62

47.6

Associated Gene:

Gene:

HAPLN2

Ensembl Gene ID:

ENSAPLG00000016119

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016809

15083 - 16796

1714