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Intron Name: Anas_platyrhynchos_platyrhynchos_26_15602_15770_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

15602 - 15770

Intron Length:

169

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATCGCCC

5'SS Class:

major

3'SS Sequence:

GCTCGCCCCGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTCAA

U12 Branch Point Sequence:

TATTTGTCAATT

Flanking Amino Acid:

RLATYQQLYKAWTEGLDWCN

Intron Amino Acid Position:

225

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

65.9

0.37

1.2

43.2

Major BPS

75.6

0.64

1.1

77.7

37.1

Major PPT

65.9

0.36

0.9

33.2

Minor 5ss

43.6

-0.7

3.1

60.3

44.3

Minor BPS

52.5

0.16

2.2

76.85

40.1

Associated Gene:

Gene:

HAPLN2

Ensembl Gene ID:

ENSAPLG00000016119

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016809

15083 - 16796

1714