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Intron Name: Anas_platyrhynchos_platyrhynchos_26_1572858_1573135_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1572858 - 1573135

Intron Length:

278

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTGAGAGCC

5'SS Class:

major

3'SS Sequence:

TGTCCTCCTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GACTGAC

U12 Branch Point Sequence:

TCGGACTGACTT

Flanking Amino Acid:

AKTFLTHTLPPKMSIDDYIN

Intron Amino Acid Position:

216

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.6

0.63

63.4

35.3

Major BPS

55.9

0.15

1.2

Major PPT

0.68

0.8

73.8

31.3

Minor 5ss

26.7

-2.7

3.2

34.9

41.1

Minor BPS

43.3

-0.4

1.9

57.04

45.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000024260

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028804

1572489 - 1577926

5438