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Intron Name: Anas_platyrhynchos_platyrhynchos_26_1573679_1576178_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1573679 - 1576178

Intron Length:

2500

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTGAGTGTG

5'SS Class:

strong_major

3'SS Sequence:

TGTTTTGCACTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCACAA

U12 Branch Point Sequence:

TTGTTTTGCACT

Flanking Amino Acid:

LIQKELTIGPRVWCVPSLIN

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.4

0.76

0.9

72.6

38.9

Major BPS

47.4

-0.1

52.5

32.6

Major PPT

69.5

0.44

63.7

42.8

Minor 5ss

31.3

-2.1

3.3

40.9

45.3

Minor BPS

52.3

0.15

1.9

75.75

41.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000024260

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028804

1572489 - 1577926

5438