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Intron Name: Anas_platyrhynchos_platyrhynchos_26_1575816_1576178_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

3UTR

Intron Coordinates:

1575816 - 1576178

Intron Length:

363

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTGAGTGTG

5'SS Class:

strong_major

3'SS Sequence:

TTTGGGGCTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGGTAAC

U12 Branch Point Sequence:

CGTCTGGTAACG

Flanking Amino Acid:

3UTR

Intron Amino Acid Position:

3UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.4

0.76

0.9

72.6

38.9

Major BPS

59.3

0.23

1.3

61.4

43.2

Major PPT

69.9

0.45

1.1

61.9

44.4

Minor 5ss

31.3

-2.1

3.3

40.9

45.3

Minor BPS

40.8

-0.8

2.5

48.56

45.1

Associated Gene:

Gene:

S100A4

Ensembl Gene ID:

ENSAPLG00000010031

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022247

1575577 - 1578627

3051