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Intron Name: Anas_platyrhynchos_platyrhynchos_26_1577861_1583656_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

1577861 - 1583656

Intron Length:

5796

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

GTG|GCCATGGGC

5'SS Class:

weak_major

3'SS Sequence:

CAGGGACAACGAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

AGCTGAT

U12 Branch Point Sequence:

GCAACCTGGACA

Flanking Amino Acid:

KEFACFLACVVDFHEYATFL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

59.3

0.22

1.3

59.5

39.1

Major BPS

67.4

0.43

1.1

57.1

41.8

Major PPT

39.3

-0.6

1.6

26.2

35.8

Minor 5ss

14.9

-4.1

3.7

21.2

31.3

Minor BPS

51.5

0.04

1.6

57.78

41.1

Associated Gene:

Gene:

S100A4

Ensembl Gene ID:

ENSAPLG00000010031

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010434

1577762 - 1584473

6712