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Intron Name: Anas_platyrhynchos_platyrhynchos_26_1583951_1584328_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

1583951 - 1584328

Intron Length:

378

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAA|GTGTCCGTG

5'SS Class:

weak_major

3'SS Sequence:

CTCGGCGAGGCAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTGTTAA

U12 Branch Point Sequence:

AGCTTGTTAACA

Flanking Amino Acid:

NKELPSFGSVKADLLVNDLD

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.07

1.2

49.5

41.5

Major BPS

72.1

0.55

1.2

63.7

43.9

Major PPT

51.7

0.04

1.1

46.1

40.6

Minor 5ss

47.8

-0.2

3.1

63.2

43.2

Minor BPS

55.2

0.16

2.1

65.76

40.9

Associated Gene:

Gene:

S100A4

Ensembl Gene ID:

ENSAPLG00000010031

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010434

1577762 - 1584473

6712