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Intron Name: Anas_platyrhynchos_platyrhynchos_26_1608581_1608692_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1608581 - 1608692

Intron Length:

112

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTGAGTACC

5'SS Class:

strong_major

3'SS Sequence:

GTCGCTGTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGCTAAT

U12 Branch Point Sequence:

TCTGCCTGGAAT

Flanking Amino Acid:

ALLRGGLPLRGQSMLRGGRG

Intron Amino Acid Position:

135

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.7

0.77

0.9

74.9

35.3

Major BPS

70.5

0.51

1.1

69.7

35.5

Major PPT

71.9

0.49

64.7

41.3

Minor 5ss

31.1

-2.2

2.6

35.1

Minor BPS

53.9

0.2

1.8

72.94

43.9

Associated Gene:

Gene:

CHTOP

Ensembl Gene ID:

ENSAPLG00000009925

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010339

1603750 - 1610246

6497