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Intron Name: Anas_platyrhynchos_platyrhynchos_26_1608831_1610043_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1608831 - 1610043

Intron Length:

1213

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTCAGTGCA

5'SS Class:

strong_major

3'SS Sequence:

TCGTCTCTGTAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTATAAC

U12 Branch Point Sequence:

TGCCGTATAACT

Flanking Amino Acid:

AMGRGGLGGRGRGMAGRGRG

Intron Amino Acid Position:

181

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.6

0.72

1.2

35.3

Major BPS

60.2

0.25

1.3

39.8

Major PPT

61.9

0.27

1.2

67.7

Minor 5ss

28.4

-2.5

2.9

33.4

41.6

Minor BPS

47.4

-0.1

66.9

43.7

Associated Gene:

Gene:

CHTOP

Ensembl Gene ID:

ENSAPLG00000009925

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010339

1603750 - 1610246

6497