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Intron Name: Anas_platyrhynchos_platyrhynchos_26_16418_16591_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16418 - 16591

Intron Length:

174

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTACGGAGC

5'SS Class:

major

3'SS Sequence:

TGGCCCCCCGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTGAG

U12 Branch Point Sequence:

GTGCCCTGAGCT

Flanking Amino Acid:

STFQRPTGSPAAPRLQYLLE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.2

0.48

1.1

58.9

Major BPS

-0.1

1.5

42.6

40.4

Major PPT

65.8

0.35

0.9

58.5

Minor 5ss

31.1

-2.2

3.3

41.7

Minor BPS

0.2

1.8

71.77

44.3

Associated Gene:

Gene:

HAPLN2

Ensembl Gene ID:

ENSAPLG00000016119

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016809

15083 - 16796

1714