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Intron Name: Anas_platyrhynchos_platyrhynchos_26_164629_164858_R


Intron Information:

Intron Rank:
17

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
164629 - 164858

Intron Length:
230

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GAG|GTAGGATGG

5'SS Class:
major

3'SS Sequence:
TCCCGGTCCCCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTGTCAA

U12 Branch Point Sequence:
CTTTTGTCAAAC

Flanking Amino Acid:
ILRTPASDLEEASHEHLMRR

Intron Amino Acid Position:
790

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
79.2
0.69
1
63.4
43.8

Major BPS
75.6
0.64
1.1
77.7
37.1

Major PPT
66.5
0.37
0.9
56.7
38.7

Minor 5ss
35.9
-1.6
3.3
47.1
48.3

Minor BPS
46.7
-0.2
2.3
63.16
42.4

Associated Gene:

Gene:
IQGAP3

Ensembl Gene ID:

Chromosome:
26

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

163430 - 170180
6751