Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_26_164937_164996_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

164937 - 164996

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

AAG|GCACCTGAA

5'SS Class:

major

3'SS Sequence:

CAGCACCAAGCAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CACCCAA

U12 Branch Point Sequence:

TTGTCCCCAGCA

Flanking Amino Acid:

LEESKKIPWKMLVDVIQSQP

Intron Amino Acid Position:

764

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.64

1.2

65.3

43.4

Major BPS

47.2

-0.1

1.1

32.5

Major PPT

51.5

0.03

44.7

Minor 5ss

26.1

-2.7

4.1

46.1

Minor BPS

48.9

-0

2.1

68.75

43.3

Associated Gene:

Gene:

IQGAP3

Ensembl Gene ID:

ENSAPLG00000007690

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008028

163430 - 170180

6751