Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_26_166324_166402_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

166324 - 166402

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGGGGACC

5'SS Class:

major

3'SS Sequence:

TCCTGTGCCCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTGAG

U12 Branch Point Sequence:

CCCTGCTGAGCT

Flanking Amino Acid:

PRASEEEVDKVVGNLLYYRF

Intron Amino Acid Position:

589

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.1

0.62

35.3

Major BPS

52.2

0.06

1.6

51.1

46.3

Major PPT

65.5

0.35

0.9

57.4

38.6

Minor 5ss

26.7

-2.7

3.2

34.1

41.8

Minor BPS

45.1

-0.2

2.1

60.09

49.1

Associated Gene:

Gene:

IQGAP3

Ensembl Gene ID:

ENSAPLG00000007690

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008028

163430 - 170180

6751