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Intron Name: Anas_platyrhynchos_platyrhynchos_26_167302_167466_R


Intron Information:

Intron Rank:
9

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
167302 - 167466

Intron Length:
165

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTGGGTGGC

5'SS Class:
strong_major

3'SS Sequence:
CTCCCCCCCCCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTCCCAC

U12 Branch Point Sequence:
TCTTTCCCACCT

Flanking Amino Acid:
LFKAALQEEIRSKVDHIHDI

Intron Amino Acid Position:
438

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
80.1
0.71
1
67.2
38.1

Major BPS
62.4
0.31
1.2
72.4
34.6

Major PPT
70.7
0.47
0.7
61.5
29

Minor 5ss
26.2
-2.7
3.2
34.3
42

Minor BPS
47.5
-0.1
2.1
72.26
44.7

Associated Gene:

Gene:
IQGAP3

Ensembl Gene ID:

Chromosome:
26

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

163430 - 170180
6751