Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_26_169586_169659_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

169586 - 169659

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCCGGGGG

5'SS Class:

major

3'SS Sequence:

TGTGTCCCCGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTGAC

U12 Branch Point Sequence:

AGGTTGTGACCC

Flanking Amino Acid:

TTHLSREEIQSVITQVTSAH

Intron Amino Acid Position:

132

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

62.4

0.29

1.4

51.3

42.7

Major BPS

71.3

0.53

1.2

63.1

44.5

Major PPT

0.52

0.9

66.4

35.7

Minor 5ss

-3.1

3.3

29.7

43.1

Minor BPS

-0.7

2.2

49.62

40.8

Associated Gene:

Gene:

IQGAP3

Ensembl Gene ID:

ENSAPLG00000007690

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008028

163430 - 170180

6751