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Intron Name: Anas_platyrhynchos_platyrhynchos_26_1739446_1739713_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1739446 - 1739713

Intron Length:

268

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGAAAA

5'SS Class:

strong_major

3'SS Sequence:

TCCTTTTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTGAA

U12 Branch Point Sequence:

CAATTCTGAACG

Flanking Amino Acid:

YVPTTAVPHTGYSYPGSSQH

Intron Amino Acid Position:

1581

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.9

1.01

0.7

23.7

Major BPS

82.1

0.8

71.6

36.4

Major PPT

91.1

0.92

0.6

87.3

23.2

Minor 5ss

32.8

-2

2.9

39.7

45.8

Minor BPS

57.7

0.1

1.6

58.11

43.1

Associated Gene:

Gene:

NUP210L

Ensembl Gene ID:

ENSAPLG00000014606

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015245

1738560 - 1766515

27956